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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906857.1_cds_XP_016457042.1_50811
CDS Infomation

[gene=LOC107780930] [db_xref=GeneID:107780930] [protein=phospho-N-acetylmuramoyl-pentapeptide-transferase homolog] [protein_id=XP_016457042.1] [location=join(38881..39048,39142..39219,41218..41441,41651..42098,42183..42247,42801..42994,43208..43416,44287..44469)] [gbkey=CDS]
Sequence

ATGATAGTTATGCGAAGGTCTTGTGCTTCAAATTTAGATTGGAATTCTGATTTCTATAGA
CTTGGGTTTTATCAAAATGGAAAAGGGTCTCCGAATCTGAAATTTCAGCATTTGTTGATC
AACTTTTATCCTCATCATATCAGATTAAGCCCGCATCTTCCTTTGAAGATCTGTAGATCA
AGTGCTAGGCGTTACGGGTTATTATGTTTGCCTCCTAGGCTTCTTCAAGTTCGAGCAATG
GATGGGGATTTTGGGTTCTCTTCACTCCATGACTGGGGAGACAATAATGGAGCAATTGAT
TATAGGCTCTCTGCAAGTGAAGGTGAAGAAAGCGATGGAGATATTATACTACAGCCGATC
ACTGATGTTGATTTGCCTACCCCCAAGGAGCAGTTTTATCCAGCCGACGACTCCATAACA
GCAACTGCCCACCGGTTATCAATGCTTGGCAGAGCGTACAAGAGAAAAAAGACAAAATAT
GGCATTCTAAACAACATAGGCCTCATAACATTCTCAGCGGTGCTTCTGTCTCTTGTGGAT
TGTTGTGCGTGGAAGATTGTCAGACTGCCCCTGGCTCCACTTTACCTGATGCGTCCCTTT
CTCATTTCTGCAGTGGCAGTGTCTTGTGTAGGTTATGTCTGTGTCCCATTATTTCGCAGT
TTTAAACTCCAATCGTTAATCAGGAAGGAGGGGCCTGCTCGGCACTCTAGTAAGAAAGGA
ACTCCTACTATGGGTGGACTGTATTTTGTCCCCATTGGAGTAATTGTTGCAGAAATTATT
GTTGGGTTTTCTTCTCCGGAAGTTTTCGGAGCATCTGCAGCAACTTTAGTTTTTGCAGCA
ATTGGATTACTCGATGACTTGATAAGTATGAGGAATAATAATGTTGGCTTATCCGCTCGA
TTTAGAATCATATTGGAGGTAGTTGCTGGGACATTCTTCTCCTTTTGGCTGTACACGTCG
GACATACCGTCACCCTACAGCATGAAAGCAGTGGTTCCCCTACCTGCGCCTCTTGGGCTC
GTATGTCTTGGAAGACTCTATCCTTTTTTAACCTCGTTTTGCTTTGTTTCCATGGCTAAT
GGAATTAATCTTACTGATGGTCTCGATGGATTGGCTGGAGGAACTGCCACATTGGCGTTC
ATTGCAATGTCGATTGCAGTGCTTCCTATATGTTCTGAGCTTTCCATATTTGGAGCATCC
ATGGCAGGAGCCTGTGCAGGTTTTCTTCTGCACAACCGGTACAAAGCATCAATATTTATG
GGTGATACAGGAGCCTTAGCCTTAGGAGGCGCACTTGCTTCTATGGCTGCTTGTACAGGG
ATGTTCTTTCCATTGTTCATTTCATCTGGTGTTTTTATCCTGGAAGCACTATCAGTTATA
CTGCAGGTTTCCTTCTTCAAGACAACAAAGTATTTTCGAGGAACTGGACGCCGCTTGTTT
CGGATGGCACCCTTTCATCACCACCTTGAATTATGTGGGGTAAAAGAACCTGTCATAGTT
GCTGGTGCATATGTTTTTTCTTGCATTTTAGCCTTGAGTGCCGGATATGTGGGACTCACT
TCAGTATAA

Peptide Sequence

PEP ID

XP_016457042.1
PEP Infomation

PREDICTED: phospho-N-acetylmuramoyl-pentapeptide-transferase homolog [Nicotiana tabacum]
Sequence

MIVMRRSCASNLDWNSDFYRLGFYQNGKGSPNLKFQHLLINFYPHHIRLSPHLPLKICRS
SARRYGLLCLPPRLLQVRAMDGDFGFSSLHDWGDNNGAIDYRLSASEGEESDGDIILQPI
TDVDLPTPKEQFYPADDSITATAHRLSMLGRAYKRKKTKYGILNNIGLITFSAVLLSLVD
CCAWKIVRLPLAPLYLMRPFLISAVAVSCVGYVCVPLFRSFKLQSLIRKEGPARHSSKKG
TPTMGGLYFVPIGVIVAEIIVGFSSPEVFGASAATLVFAAIGLLDDLISMRNNNVGLSAR
FRIILEVVAGTFFSFWLYTSDIPSPYSMKAVVPLPAPLGLVCLGRLYPFLTSFCFVSMAN
GINLTDGLDGLAGGTATLAFIAMSIAVLPICSELSIFGASMAGACAGFLLHNRYKASIFM
GDTGALALGGALASMAACTGMFFPLFISSGVFILEALSVILQVSFFKTTKYFRGTGRRLF
RMAPFHHHLELCGVKEPVIVAGAYVFSCILALSAGYVGLTSV

Transcript Sequence

Gene sequence data has not been registered.